FIASCO

How fMRI Relates to Brain Function

The "functional" part of fMRI deals with the nature of blood within the brain. "Blue" blood (deoxygenated hemoglobin) is more paramagnetic than "red" blood (oxygenated hemoglobin). This would suggest that the two kinds of blood would react differently when in a magnetic field. In fact, the MR signal from the blue blood is stronger than that of red blood. In the late 1980's it was shown (using PET, positron emission tomography) that areas of the brain that are active, performing some function, require an increased supply of blood but do not actually utilize the increase in the available oxygen. So, when the blood leaves regions of active brain tissue it is more oxygenated than in the rest of the brain. Thus, this blood interferes less with the local magnetic field than it would if it were deoxygenated. The MR signal then appears stronger than it would be in areas where there is not activation of the brain tissue. So by comparing images, these areas are then identifiable by their differing values. This particular way of finding activation is called Blood Oxygenation Level Dependent imaging, or BOLD imaging.
How the Machine Works fMRI and Statistics

Fiasco is a toolkit for analysis of functional brain images developed at the CMU Department of Statistics. See the Fiasco Home Page for more information.
fiasco@stat.cmu.edu